Featured publications

Longitudinal gut virome analysis identifies specific viral signatures that precede necrotizing enterocolitis onset in preterm infants

April 21, 2022

Kaelin EA, Rodriguez C, Hall-Moore C, Hoffmann JA, Linneman LA, Ndao IM, Warner BB, Tarr PI, Holtz LR, Lim ES. Longitudinal gut virome analysis identifies specific viral signatures that precede necrotizing enterocolitis onset in preterm infants. Nat Microbiol. 2022 Apr 21. doi: 10.1038/s41564-022-01096-x. Epub ahead of print. PMID: 35449461.

Growth velocity in children with Environmental Enteric Dysfunction is associated with specific bacterial and viral taxa of the gastrointestinal tract in Malawian children

June 23, 2020

Desai C, Handley SA, Rodgers R, Rodriguez C, Ordiz MI, Manary MJ, Holtz LR. Growth velocity in children with Environmental Enteric Dysfunction is associated with specific bacterial and viral taxa of the gastrointestinal tract in Malawian children. PLoS Negl Trop Dis. 2020 Jun 23;14(6):e0008387. doi: 10.1371/journal.pntd.0008387. PMID: 32574158; PMCID: PMC7310680.

Discordant transmission of bacteria and viruses from mothers to babies at birth

December 10, 2019

Maqsood R, Rodgers R, Rodriguez C, Handley SA, Ndao IM, Tarr PI, Warner BB, Lim ES, Holtz LR. Discordant transmission of bacteria and viruses from mothers to babies at birth. Microbiome. 2019 Dec 10;7(1):156. doi: 10.1186/s40168-019-0766-7. PMID: 31823811; PMCID: PMC6902606.

Amniotic fluid from healthy term pregnancies does not harbor a detectable microbial community

May 11, 2018

Lim ES, Rodriguez C, Holtz LR. Amniotic fluid from healthy term pregnancies does not harbor a detectable microbial community. Microbiome. 2018 May 11;6(1):87. doi: 10.1186/s40168-018-0475-7. Erratum in: Microbiome. 2019 Feb 12;7(1):22. PMID: 29751830; PMCID: PMC5946436.

Early life dynamics of the human gut virome and bacterial microbiome in infants

October 1, 2015

Lim ES, Zhou Y, Zhao G, Bauer IK, Droit L, Ndao IM, Warner BB, Tarr PI, Wang D, Holtz LR. Early life dynamics of the human gut virome and bacterial microbiome in infants. Nat Med. 2015 Oct;21(10):1228-34. doi: 10.1038/nm.3950. Epub 2015 Sep 14. PMID: 26366711; PMCID: PMC4710368.

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